FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15155128
Sequences flagged as poor quality0
Sequence length79-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT348900.010.438265120
GATCTCG318900.09.294222120
CTCGGTG260900.09.175705120
GCGTCGG53700.09.050057120
TCTCGGT282250.09.034323120
AGTGTAG498850.09.008499120
ATCTCGG303350.08.999285120
AGATCTC336350.08.758519120
AGAGTGT591300.08.736468120
TGGTCGC164550.08.678120
GAGTGTA537150.08.567229120
GTAGATC476750.08.482225120
GTGTAGA490350.08.381562120
GTGGTCG183650.08.36353120
TCGGTGG264650.08.07084120
GGTCGCC163650.08.065797120
AAGAGTG665350.08.025654120
GGTGGTC211650.07.8523936120
GTCGCCG168350.07.8049765120
TGTAGAT537600.07.723025120
Produced by FastQC (version 0.11.5)