FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16190604
Sequences flagged as poor quality0
Sequence length53-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT431100.09.6656120
GTGGTCG230000.08.914565120
GCGTCGG85000.08.700811120
AGATCTC420150.08.65814120
TCGGTGG313800.08.603338120
TCTCGGT344350.08.503593120
AGTGTAG584650.08.464036120
GTAGATC566950.08.463144120
ATCTCGG369500.08.445523120
AAGAGTG762000.08.387874120
GAGTGTA623500.08.341675120
AGAGTGT683400.08.323189120
GTGTAGA568650.08.226369120
GGTGGTC264150.08.035218120
CTCGGTG336400.07.900233120
GATCTCG412000.07.880797120
TGGTCGC221350.07.8775663120
TAGGGAA1076800.07.6164565120
CGGTGGT327100.07.4079514120
GGTCGCC217200.07.3913717120
Produced by FastQC (version 0.11.5)