FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833752

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833752
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13523581
Sequences flagged as poor quality0
Sequence length58-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACCCC26200.09.8467849
AACCCCC19600.07.499610-11
CTACCCC19500.07.384999338-39
ATCTCGG213750.07.1572347120
TAGATCT242800.06.8939276120
AGTGAGT38900.06.78608231
AAGAGTG396400.06.750134120
GTAGATC301250.06.651669120
TCTCGGT198950.06.5286765118-119
GAGTGTA324050.06.46137120
GTAGGGA495600.06.3916626120
GTGTAGA318250.06.390613120
AGTGTAG309550.06.376411120
TCGGTGG209550.06.355892120
CTCGGTG202550.06.3385916120
TGGTCGC160000.06.299419120
TAGGGAA486100.06.294421120
GTGAGTA39250.06.26710032
TGTAGGG525550.06.175817120
AGAGTGT353000.06.152407120
Produced by FastQC (version 0.11.5)