FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14544856
Sequences flagged as poor quality0
Sequence length50-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1891100.013.786469120
GCGTCGG85100.012.6415825120
CATTAAA598950.08.9205120
CCTAGCG5550.0097606838.649731
CGTATCA777050.08.314527120
GCCGTAT923000.08.263003120
GTATCAT756600.08.110309120
CCGTATC887150.08.109146120
TCATTAA620050.08.060484118-119
ATCATTA696700.08.005347120
CGCCGTA961150.07.9787984120
GTCGCCG1119100.07.744161120
TCGCCGT1050850.07.7323937120
TGGTCGC1216500.07.6675677120
TTAAAAA657200.07.507989120
GTGGTCG1307000.07.5045137120
GGTCGCC1155150.07.4660606120
TATCATT797250.07.3801665120
CGGTGGT1510300.07.202667120
TCGGTGG1596600.07.2010674120
Produced by FastQC (version 0.11.5)