FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833760

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833760
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15337042
Sequences flagged as poor quality0
Sequence length64-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGTAG580650.09.759498120
TAGATCT408950.09.580928120
GATCTCG400750.09.102179120
AGAGTGT690350.08.922462120
GAGTGTA630850.08.916203120
GCGTCGG86250.08.848605120
GTGTAGA570700.08.8450775120
TGGTCGC207100.08.734069120
AGATCTC405000.08.709902120
CTCGGTG328300.08.5116205120
TCTCGGT352850.08.464405120
ATCTCGG375050.08.315883120
GTAGATC561400.08.26371120
TGTAGAT604950.08.215164120
AAGAGTG780450.08.208094120
GTGGTCG230300.08.167339120
CGGTGGT304250.07.8413367120
TCGGTGG305950.07.83705120
GGTGGTC253700.07.6982684120
GTAGGGA1175600.07.6880903120
Produced by FastQC (version 0.11.5)