FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833764

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833764
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13055731
Sequences flagged as poor quality0
Sequence length55-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA848000.011.270552120
GCGTCGG74000.09.566996120
CGTATCA375900.09.161463120
CCGTATC443150.09.0438120
TGGTCGC609850.08.88362120
GCCGTAT460550.08.858442120
GGTCGCC582550.08.784986120
GTGGTCG665200.08.721666120
GTATCAT386650.08.611924120
TCATTAA293800.08.57675120
ATCATTA346000.08.461922120
GGTGGTC733000.08.41423120
CGCCGTA485550.08.377626120
GTCGCCG579550.08.281792120
TCGCCGT556350.08.163437120
CATTAAA300400.07.9289527120
TCGGTGG842150.07.601516120
CGGTGGT807550.07.496386118-119
CTCGGTG896950.07.2976284120
TCTCGGT929700.07.1179986120
Produced by FastQC (version 0.11.5)