FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13706661
Sequences flagged as poor quality0
Sequence length50-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT445150.09.33966120
AGATCTC436650.09.2192120
AGTGTAG618000.08.85341120
ATCTCGG409250.08.766308120
GTGTAGA594800.08.734763120
TCGGTGG327700.08.622807120
GTGGTCG247300.08.51505120
GGTGGTC284000.08.470913120
TGGTCGC226400.08.426648120
AGAGTGT722750.08.392035120
GATCTCG440400.08.391461120
TCTCGGT372400.08.31274120
TGTAGAT606700.08.256893120
GAGTGTA666050.08.196694120
GTAGATC614850.08.040114120
AAGAGTG798200.08.03471120
CTCGGTG354650.07.81531120
GGTCGCC243450.07.639345120
CGGTGGT335000.07.629024120
GAAAGAG1028750.07.178809120
Produced by FastQC (version 0.11.5)