FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833768

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833768
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13855791
Sequences flagged as poor quality0
Sequence length56-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCGCC342750.08.140007120
GTGGTCG376100.08.040379120
TGGTCGC346750.07.924983120
GGTGGTC412150.07.9194117120
CGCCGTA307800.07.8362226120
TCGGTGG477650.07.7629724120
AGATCTC637850.07.713378120
AAAAAAA806500.07.692464120
TAGATCT661850.07.633116120
ATCTCGG574450.07.551538120
CGGTGGT461950.07.468307120
GCGTCGG75550.07.3858047120
CGTATCA247050.07.310229120
CTCGGTG505100.07.281694120
TCTCGGT523300.07.074279118-119
CCGTATC294100.06.9771876120
GATCTCG614650.06.872173120
GAGTGTA882150.06.6791058120
GCCGTAT296600.06.6149163118-119
GTGTAGA819150.06.606819120
Produced by FastQC (version 0.11.5)