FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14621421
Sequences flagged as poor quality0
Sequence length53-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT547000.09.837753120
GTGGTCG287950.09.583664120
TCTCGGT424800.09.504327120
TCGGTGG383750.09.332903120
GGTGGTC320000.09.073736120
GATCTCG513050.08.992024120
CTCGGTG413400.08.953761120
ATCTCGG470600.08.847047120
AGATCTC521400.08.70995120
AGTGTAG739850.08.538381120
TGGTCGC273050.08.458812120
GTGTAGA715750.08.39003120
GGTCGCC278100.08.024774120
GAGTGTA789850.08.013064120
AGAGTGT854300.07.9984183120
CGGTGGT376500.07.9670186120
GTAGATC701050.07.787234120
AAGAGTG932700.07.609105120
CGTATCA178950.07.542957120
GCCGTAT240600.07.530124120
Produced by FastQC (version 0.11.5)