FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833782

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833782
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15351293
Sequences flagged as poor quality0
Sequence length54-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG115650.011.517319120
TGGTCGC428100.09.179945120
GGTGGTC506400.08.957197120
GTGGTCG466050.08.702785120
CTCGGTG648050.08.601045120
GGTCGCC418650.08.598926120
TCGGTGG600550.08.42214120
TCTCGGT678400.08.3842945120
CGTATCA276700.08.239835120
CGGTGGT571500.08.199339120
ATCTCGG736850.08.044923120
TAGATCT860500.07.913872120
AGATCTC832100.07.8450804120
GATCTCG811600.07.814064120
CCGTATC339050.07.697852120
GCCGTAT348550.07.6946073120
AGTGTAG1120600.07.602944120
GTGTAGA1083800.07.584299120
AAAAAAA840500.07.5239677120
GAGTGTA1189800.07.4935718120
Produced by FastQC (version 0.11.5)