FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833790

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833790
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14395139
Sequences flagged as poor quality0
Sequence length54-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC356500.08.2141485120
TGGTCGC304400.08.14156120
CTCGGTG458600.08.112597120
AGATCTC548850.08.101524120
GTGGTCG335550.08.047436120
GGTCGCC319100.07.9545536120
TAGATCT574200.07.8901634120
TCTCGGT478550.07.8370924120
CGGTGGT411950.07.76399120
GATCTCG553150.07.6588583120
TCGGTGG421350.07.605022120
AGTGTAG745650.07.379663120
ATCTCGG517400.07.266118-119
GCGTCGG110200.07.187776120
GAGTGTA794600.07.076089120
GTAGATC719500.07.0557275120
GTGTAGA724500.06.874513120
CGTATCA208000.06.8517423118-119
CGCCGTA307500.06.8300705120
TGTAGAT750100.06.639894120
Produced by FastQC (version 0.11.5)