FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833802

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833802
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16110312
Sequences flagged as poor quality0
Sequence length52-126
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC850.006927560528.2326371
TCTCGGG31450.015.261025120
CCCCCTA4353.7023347E-715.1709851
GCGTCGG78950.013.9823475120
CCCCCCA4105.398135E-513.1694921
AAAAAAA1747100.011.8128605120
GTAGGGG23550.011.463996120
CCGTATC862800.011.174294120
CGGTGGG23650.011.161843120
CGTATCA764500.010.955251120
GCCGTAT940950.010.507637120
CGCCGTA1020200.010.455886120
GTATCAT745650.010.419555120
GTCGCCG1224700.09.998336120
TCGCCGT1154950.09.968417120
TGGTCGC1392500.09.896467120
GGTCGCC1279550.09.799489120
GTGGTCG1512950.09.600296120
TCATTAA626150.09.466577120
CCCCCAA13651.1823431E-109.22991
Produced by FastQC (version 0.11.5)