FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14536704
Sequences flagged as poor quality0
Sequence length54-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG120200.09.983207120
TGGTCGC358000.08.714949120
GGTGGTC416650.08.625812120
GTGGTCG391050.08.622805120
ATCTCGG605700.08.449596120
TCGGTGG500450.08.164525120
TAGATCT684500.08.160575120
GATCTCG660300.08.014415120
CTCGGTG531950.07.8953567120
AGATCTC657450.07.8440237118-119
GGTCGCC362350.07.815527120
TCTCGGT549250.07.701292120
CGGTGGT479050.07.665052120
AGTGTAG899900.07.607394120
AGAGTGT1022000.07.58501120
GTAGATC862700.07.4485917120
GTGTAGA871800.07.3433137120
CGTATCA232450.07.2788725120
GCCGTAT309750.07.2638097120
TGTAGAT887100.07.2098985120
Produced by FastQC (version 0.11.5)