FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12463965
Sequences flagged as poor quality0
Sequence length52-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC306800.09.605296120
TGGTCGC259550.09.342109120
TAGATCT506600.08.47082120
GTGGTCG285950.08.416643120
TCTCGGT415300.08.280895120
TCGGTGG374850.08.277852120
CGGTGGT361850.08.143995120
AGATCTC488950.08.089199120
CTCGGTG396950.08.028666120
ATCTCGG455950.07.9901714120
GCGTCGG85100.07.9695444120
GGTCGCC264250.07.926748120
GTGTAGA664300.07.887413120
GTAGATC692550.07.8083324120
AGTGTAG681050.07.755116120
TCCGATC69250.07.7117963
GATCTCG493800.07.6329637120
CGATCTA19704.5474735E-117.614815
CCGATCT72600.07.6039024
GAGTGTA727550.07.5811877120
Produced by FastQC (version 0.11.5)