FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833814

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833814
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15318783
Sequences flagged as poor quality0
Sequence length57-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1190600.011.190277120
GCGTCGG128050.09.108756120
CGTATCA456650.09.031868120
TCATTAA381550.08.729618120
TGGTCGC742050.08.653166120
GTGGTCG803100.08.444549120
CGGTGGT966450.08.205449120
GGTCGCC715050.08.164315120
GTATCAT460300.08.124308120
TCGGTGG1017350.08.0253935120
ATCATTA424800.07.883292120
CGCCGTA647900.07.8783746120
GGTGGTC867550.07.7479043120
GCCGTAT591000.07.7009687120
GTCGCCG764500.07.6755457120
TCTCGGT1182150.07.6135316120
CTCGGTG1121300.07.5709405120
AGATCTC1386550.07.4321117120
CCGTATC538050.07.331893118-119
TAGATCT1439150.07.294157120
Produced by FastQC (version 0.11.5)