FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15927583
Sequences flagged as poor quality0
Sequence length56-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG118700.011.01857120
TGGTCGC280950.08.904847120
GAGTGTA810300.08.833118120
TAGATCT562500.08.831353120
TCGGTGG387350.08.766623120
TCTCGGT437800.08.53752120
GTGGTCG302350.08.532533120
ATCTCGG485850.08.471129120
AGTGTAG755250.08.45221120
AGATCTC538900.08.449928120
GGTGGTC329650.08.371903120
CTCGGTG420700.08.356887120
GTGTAGA741050.08.241755120
AGAGTGT878250.08.19752120
GATCTCG540800.08.120707120
GGTCGCC280550.08.019373120
GTAGATC823850.07.646463120
AAGAGTG956250.07.622971120
CGGTGGT374850.07.5384636120
CGTATCA187350.07.4294120
Produced by FastQC (version 0.11.5)