FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833826

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833826
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14449777
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGTGG381550.08.680496120
TAGATCT540000.08.500112120
GGTGGTC322900.08.473323120
AGATCTC516450.08.283583120
ATCTCGG458450.08.219107120
GTGGTCG294350.08.194434120
GATCTCG515250.08.139845120
TCTCGGT417500.08.076753120
GTGTAGA685600.07.885168120
AGTGTAG692050.07.803007120
TGGTCGC267000.07.707967120
AGAGTGT792450.07.6245565120
GAGTGTA732150.07.596904120
CTCGGTG404650.07.5918455120
CGGTGGT368300.07.5591545120
GTAGATC678500.07.3486595120
GGTCGCC277550.07.2204156120
GCGTCGG104300.07.075836120
AAGAGTG874750.07.0238132120
TGTAGAT731200.07.0077505120
Produced by FastQC (version 0.11.5)