FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15951290
Sequences flagged as poor quality0
Sequence length71-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG81650.013.079876120
TAGATCT435350.09.578248120
AGTGTAG606000.09.1581745120
AGATCTC433850.08.836924120
AGAGTGT719450.08.564651120
TCGGTGG313800.08.489261120
TCTCGGT354200.08.486507120
GATCTCG424350.08.48334120
TGGTCGC206350.08.432053120
GAGTGTA654300.08.427105120
ATCTCGG384550.08.425211120
GTAGATC599750.08.423288120
GGTGGTC260050.08.375092120
GTGTAGA592500.08.202315120
CGGTGGT309250.08.090328120
GTGGTCG228750.07.973561120
AAGAGTG808800.07.8113675120
TAGGGAA1111650.07.7558336120
CTCGGTG341100.07.7308974118-119
GGTCGCC210400.07.699417120
Produced by FastQC (version 0.11.5)