FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833840

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833840
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13103853
Sequences flagged as poor quality0
Sequence length66-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC310450.09.167534120
GGTGGTC374250.08.6315120
GTGGTCG346400.08.597449120
CTCGGTG463100.08.570231120
GCGTCGG93550.08.343829120
TCGGTGG440650.08.325557120
AGATCTC573100.08.203463120
AGTGTAG801050.08.147714120
TAGATCT596500.08.093035120
GTGTAGA778450.08.037164120
GGTCGCC319150.08.03339120
ATCTCGG534850.08.015527120
TCTCGGT486650.07.7609215118-119
GATCTCG584900.07.7402606120
GAGTGTA855950.07.667214120
CGGTGGT423800.07.474932118-119
AGAGTGT912750.07.459798120
AAAAAAA582550.07.3901258120
GTAGATC784950.07.381611120
TGTAGAT798150.07.2971463120
Produced by FastQC (version 0.11.5)