FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004834032

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004834032
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36096621
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTGGA97650.07.48970841
CCCAAAG562400.07.13404231
ACGGGAT63450.07.1219199
GCGTGAG146150.06.65676222
CCAAAGT531950.06.45835352
CGTGAGC150350.06.447833523
CCCAAAA294300.06.30657151
ACAGGCG208350.06.25890618
AACGGGA91250.06.23746978
ACCGCGC51700.06.20565631
GGATTAC535150.06.169137513
CCCAAGT235700.06.162031
AAACGGG108150.06.15583477
AAAGTGC471150.06.0692274
GAGCCAC404100.06.052891326
GGGATTA574000.06.03989812
CGGGATT66650.06.003697410
TTACAGG577650.05.936034716
GCCACCG137500.05.92093328
GGAAACG124000.05.89742665
Produced by FastQC (version 0.11.5)