FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004834036

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004834036
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32931730
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAG496850.07.38760141
ACGGGAT58150.07.17783939
CGGGATT59450.07.07894810
ACCGCGC41800.06.68514831
CGTTGGA94350.06.65451771
CGTGAGC127850.06.611127423
GCGTGAG127900.06.60852322
CCAAAGT474800.06.57451342
AACGGGA84000.06.44729858
ACAGGCG181400.06.40904918
AAACGGG101000.06.31835177
CCCAAGT203250.06.279981
CCCTAAA145250.06.2701061
GAGCCAC350350.06.262646726
GGATTAC461600.06.240285413
GCCACCG114350.06.21461528
CCCATAA132750.06.2108421
CCCGATT17803.6379788E-126.20179031
CACCGCG47850.06.200330330
GGGATTA491700.06.08259412
Produced by FastQC (version 0.11.5)