FastQCFastQC Report
Thu 16 May 2024
EGAF00004834125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004834125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40756940
Total Bases5.1 Gbp
Sequences flagged as poor quality0
Sequence length126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2871110.7044468991047905No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1219070.29910734220969487No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT919290.22555422463021021No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)