FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004835793

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004835793
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40
Sequences flagged as poor quality0
Sequence length250-251
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG512.5No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG410.0No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG410.0No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCATGCTTTCGTACCTCAG37.5No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG25.0No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTACATCAG12.5No Hit
GACTACTGGGGTATCTAGTCCTGTTTGCTCCCCACGCTTTCGCACCTCAG12.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCATGCTTTCGTACCTCAG12.5No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTCCCCACACTTTCGCTCCTCAG12.5No Hit
GACTACCCGGGTATCTAATCCTGGAAGGCTGTCTGACCTCACCCCGTTTC12.5No Hit
GACTACAAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG12.5No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG12.5No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG12.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG12.5No Hit
GACTACAAGGGATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAGC12.5No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG12.5No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG12.5No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGCACCTCAG12.5No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG12.5No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCGCACCTTCGCGCCTAAG12.5No Hit
GACTACAAGGGTATCTAATCCTGTTTGGTCCCCACGCTTTCGCGCCTCAG12.5No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCCTTCGCGCCTCAG12.5No Hit
GACTACCCGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG12.5No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG12.5No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA12.5No Hit
GACTACTGGGGTATCTAATCCTGTATGCTCCCCACGCTTTCGCGCCACAG12.5No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCAG12.5No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)