FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004835798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004835798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55
Sequences flagged as poor quality0
Sequence length82-251
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT59.090909090909092No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC47.2727272727272725No Hit
CCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC47.2727272727272725No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT35.454545454545454No Hit
CCTACGGGGGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT35.454545454545454No Hit
CCTACGGGTGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC35.454545454545454No Hit
CCTACGGGGGGCTGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT35.454545454545454No Hit
CCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT35.454545454545454No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGAT23.6363636363636362No Hit
CCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT23.6363636363636362No Hit
CCTACGGGCGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT23.6363636363636362No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT23.6363636363636362No Hit
CCTACGGGGGGCTTTCTGGTCTGTAACTGACGCTGAGGCTCGACAGCGTG11.8181818181818181No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT11.8181818181818181No Hit
CCTACGGGAGGCTGCAGTAGGGAATATTCCGCAATGGGCGAAAGTCTGAC11.8181818181818181No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAC11.8181818181818181No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGAAACCCTGAT11.8181818181818181No Hit
CCTACGGGGGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT11.8181818181818181No Hit
CCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAAGCCTGAT11.8181818181818181No Hit
CCTACGGGCGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC11.8181818181818181No Hit
CCTACGGGGGGCAGCAGTGAGGAATATTGCACAATGGGCGAAAGCCTGAT11.8181818181818181No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT11.8181818181818181No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT11.8181818181818181No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT11.8181818181818181No Hit
CCTACGGGTGGCTGCAGTGGGGGATATTGCGCAATGGAGGAAACCCTGAC11.8181818181818181No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGGCGATGGCCTGAA11.8181818181818181No Hit
CCTACGGGAGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC11.8181818181818181No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGAGGCAACCCTGAT11.8181818181818181No Hit
CCTACGGGCGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT11.8181818181818181No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT11.8181818181818181No Hit
CCTACGGGCGGCTGCAGTGGGGAATTTTGGACAATGGGGGGAAGCCTGAT11.8181818181818181No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)