FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004835800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004835800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences340
Sequences flagged as poor quality0
Sequence length39-251
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC3510.294117647058822No Hit
CCTACGGGGGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC154.411764705882353No Hit
CCTACGGGCGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC144.117647058823529No Hit
CCTACGGGTGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC123.5294117647058822No Hit
CCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT123.5294117647058822No Hit
CCTACGGGGGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC102.941176470588235No Hit
CCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC92.6470588235294117No Hit
CCTACGGGAGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC82.3529411764705883No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT82.3529411764705883No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT72.0588235294117645No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT72.0588235294117645No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT61.7647058823529411No Hit
CCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT51.4705882352941175No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT51.4705882352941175No Hit
CCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGGGGAACCCTGAT51.4705882352941175No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT51.4705882352941175No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA41.1764705882352942No Hit
CCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGGGGAACCCTGAT41.1764705882352942No Hit
CCTACGGGCGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC41.1764705882352942No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT41.1764705882352942No Hit
CCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT41.1764705882352942No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGAT41.1764705882352942No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT41.1764705882352942No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT41.1764705882352942No Hit
CCTACGGGAGGCTGCAGTAGGGAATCATCCGCAATGGACGAAAGTCTGAC30.8823529411764706No Hit
CCTACGGGCGGCAGCAGTAGGGAATCTTCCGCAATGGAAGAAAGTCTGAC30.8823529411764706No Hit
CCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT30.8823529411764706No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT30.8823529411764706No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT30.8823529411764706No Hit
CCTACGGGCGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT30.8823529411764706No Hit
CCTACGGGCGGCTGCAGTGGGGAATTTTGGACAATGGGGGGAACCCTGAT30.8823529411764706No Hit
CCTACGGGGGGCTGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT30.8823529411764706No Hit
CCTACGGGGGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT30.8823529411764706No Hit
CCTACGGGTGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCCGAC30.8823529411764706No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT30.8823529411764706No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGAT20.5882352941176471No Hit
CCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGACGGAAGTCTGAC20.5882352941176471No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT20.5882352941176471No Hit
CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA20.5882352941176471No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT20.5882352941176471No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGAT20.5882352941176471No Hit
CCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA20.5882352941176471No Hit
CCTACGGGTGGCTGCAGTAGGGAATCATCCGCAATGGACGAAAGTCTGAC20.5882352941176471No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT20.5882352941176471No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT20.5882352941176471No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT20.5882352941176471No Hit
CCTACGGGCGGCAGCAGTAGGGAATCTTCGGCAATGGACGGAAGTCTGAC20.5882352941176471No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGAT20.5882352941176471No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT20.5882352941176471No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT20.5882352941176471No Hit
CCTACGGGTGGCTGCAGCGGGGAATATTGGACAATGGGCGCAAGCCTGAT20.5882352941176471No Hit
CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA20.5882352941176471No Hit
CCTACGGGTGGCTGCAGTGGGGAATCTTCCGCAATGGACGAAAGTCTGAC20.5882352941176471No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT20.5882352941176471No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT20.5882352941176471No Hit
CCTAGGGCGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGATC20.5882352941176471No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGGAACCCTGAT10.29411764705882354No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGAT10.29411764705882354No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGGAACCCTGAT10.29411764705882354No Hit
CCTACGGGGTGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT10.29411764705882354No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT10.29411764705882354No Hit
CCTACGGGGGGCAGCAGTGGGGAATCTTGGACAATGGGCGAAAGCCCGAT10.29411764705882354No Hit
CCTACGGGGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCTTGATC10.29411764705882354No Hit
CCTACGGGAGGCTGCAGTAGGGAATCTTCCGCAATGGACGCAAGTCTGAC10.29411764705882354No Hit
CCTACGAGGGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGACGAGAGTCTGAA10.29411764705882354No Hit
CCTACGGGGGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT10.29411764705882354No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGAT10.29411764705882354No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGAT10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTGGGGAATTTTGCACAATGGGGGTAACCCTGAT10.29411764705882354No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGAC10.29411764705882354No Hit
CCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGACGAAACTCTGAT10.29411764705882354No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGAGCAATGGGGGCAAGCCTGAC10.29411764705882354No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT10.29411764705882354No Hit
CCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGACGGAAGTCTGAT10.29411764705882354No Hit
CCTACGGGCGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAGGTCTGAC10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGAC10.29411764705882354No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT10.29411764705882354No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT10.29411764705882354No Hit
CCGACGGGTGGCAGCAGGAGGGAAGAGGGAGGAATGGCCGAAAGTATGAG10.29411764705882354No Hit
CCTACGGGGGGCAGCAGTAGGGAATCTTCCGCAATGGACGCAAGTCTGAC10.29411764705882354No Hit
CCTACGGGCGGCAGCAGTGGGGAATTTTGGACAATGGGCGACAGCCTGAT10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA10.29411764705882354No Hit
CCTACGGGAGGCTGCGTCAGATTAGATACTCTGGTAGTC10.29411764705882354No Hit
CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGCAGGCCTGAA10.29411764705882354No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT10.29411764705882354No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT10.29411764705882354No Hit
CCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGACGGAAGTCTGAC10.29411764705882354No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAACCCCTAAT10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAA10.29411764705882354No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGAT10.29411764705882354No Hit
CCTACGGGGGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGCCTGAC10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGGCAATGGCCGAGAGGCTGAA10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCGCAATGGGGGAGACCCTGAT10.29411764705882354No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT10.29411764705882354No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGACGCAAGCCTGAC10.29411764705882354No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGGGAAACCCTGAT10.29411764705882354No Hit
CCGACGGGTGGCAGCAGGAGGGAAGAGGAAGGAATGGACGAAAGTATGAA10.29411764705882354No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGAT10.29411764705882354No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGAT10.29411764705882354No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAACCCTGAT10.29411764705882354No Hit
CCTACGGGGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGATC10.29411764705882354No Hit
CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGCCTGAA10.29411764705882354No Hit
CCTACGGGCGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACCCTGAT10.29411764705882354No Hit
CCTACGGTGGGCTGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT10.29411764705882354No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCGCAATGGGGGAAACCCTGAC10.29411764705882354No Hit
CCTACGGGTGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATC10.29411764705882354No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGAC10.29411764705882354No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGGCAATGGAGGAAACTCTGAC10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTAGGGAATCGTCCGCAATGGACGAAAGTCTGAC10.29411764705882354No Hit
CCTACGGGAGGCAGCAGTGAGGAATATTGGACAATGGGCGCAAGCCTGAA10.29411764705882354No Hit
CCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAAGCCTGAT10.29411764705882354No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAA10.29411764705882354No Hit
CCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA10.29411764705882354No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT10.29411764705882354No Hit
CCTACGGGGGGCAGCAGTGGGGAATTTTGGACAATGGGGGGAACCCTGAT10.29411764705882354No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT10.29411764705882354No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGAT10.29411764705882354No Hit
CCTACGGGGGGCTGCAGTAGGGAATATTGCGCAATGGACGAAAGTCTGAT10.29411764705882354No Hit
CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGCCTGAA10.29411764705882354No Hit
CCTACGGGAGGCAGCAGTAGGGAATCATCCGCAATGGACGAAAGTCTGAC10.29411764705882354No Hit
CCTACGGGCGGCAGCAGTGGGGAATCTTCCACAATGGGCGAAACCCTGAT10.29411764705882354No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)