FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004835805

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004835805
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences200
Sequences flagged as poor quality0
Sequence length35-251
%GC53

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG168.0No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG126.0No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA73.5000000000000004No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG63.0No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG52.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG42.0No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG42.0No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCAG42.0No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG42.0No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG42.0No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG42.0No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG42.0No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCATGCTTTCGTACCTCAG31.5No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGAG31.5No Hit
GACTACTGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG31.5No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCAG31.5No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG31.5No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG31.5No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG31.5No Hit
GACTACTGGGGTATCTAAGCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG31.5No Hit
GACTACACGGGTATCTAATCCTGTTCGCTACCCACGCTTTCGTGCCTCAG21.0No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG21.0No Hit
GACTACCCGGGTATCTAATCCTGTTCGCTACCCACGCTCTCGCGCATCAG21.0No Hit
GACTACTAGGGTATCCAATCCTGTTTGCTCCCCATGCTTTCGTACCTCAG21.0No Hit
GACTACAGGGGTATCTAAGCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG21.0No Hit
GACTACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAGCG21.0No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG21.0No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG21.0No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG21.0No Hit
GACTACTCGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGACCATCAG10.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCAG10.5No Hit
GACTACCGGGGTATCTAATCCTGTTCGCTACCCACGCCTTCGTGCATGAG10.5No Hit
GACTACTAGGGTATCTAATCCTTGCTCCTTCAGTTCACGTTCTTCTCTTC10.5No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAACCTCAG10.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGAG10.5No Hit
GACTACCCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGTCCATCAG10.5No Hit
GACTACTAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCAG10.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCACGCTTTCGCGCCTCAGC10.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCAG10.5No Hit
GCAGAGCAGGGTCGCGGGTTCTTTTTGGTATAAACACTAGAGAGCCTCAA10.5No Hit
GACTACCAGGGTATCTAATCCACATCTGACGCTGCCGACGACCCGTAGG10.5No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGCGCCTCAG10.5No Hit
GACTACCCGGGTATCTAATCCTGTTCGCTCCCCTCGCTTTCGCCCATCAG10.5No Hit
GACTACACGGGTATCTAATCCTGTTTGATACCCACGCTTTCGAGCATCAG10.5No Hit
GACTACTAGGGTCTCTCATCCTGTTTTCTCCCCTTGCTTTCGTTCCTCAG10.5No Hit
GACTACCAGGGTATCTAATCCTGCTTGACACCCACGCTTTCGTCCATCAG10.5No Hit
GACTACCCGGGGATCTAATCCTGTTTGATCCCCACGCTTTCGGGCTTCAG10.5No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCTTCAG10.5No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGTGCATCAG10.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACACTTTCGCGCCTCAC10.5No Hit
GACTACCAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCAG10.5No Hit
GACTACCGGGGTATCTAATCCTGTTTGATACCCACGCCTTCGTGCATGAG10.5No Hit
GACTCCAGGGGTATCTATTCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG10.5No Hit
GACTACTCGGGTATCTAATCCCGTTCGCTCCCCTGGCTTTCGCGCCTCAG10.5No Hit
GACTACCGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCGCATCAG10.5No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN10.5No Hit
GACTACACGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAA10.5No Hit
GACTACCCGGGTATCTAATCCTGTTCGATACCCACGCTTTCGTGCCTCAG10.5No Hit
GACTACCAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCAG10.5No Hit
GACTACTAGGGTATCTAATCCGGTTCGCTCCCCACACTTTCGCGCCTCAG10.5No Hit
NACTACTCGGGTATCTAATCCTGTTTGATCCCCACACTTTCGAGCCTCAG10.5No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTGAG10.5No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG10.5No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA10.5No Hit
GACTACTGGGGTATCTAATCCCGATCGCTCTCCTCCATCGTCCCCGACGG10.5No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGAG10.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG10.5No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGAGCCTCAG10.5No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG10.5No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG10.5No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTACCCACGCTTTCGAGCCTCAG10.5No Hit
GACGCACAGGGTCTCTGCGCGTCGTCGATCTCCGCACCGTCGAGCCTCAG10.5No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGAT10.5No Hit
GACTACTAGGGTATCTAATCCTGTCTCCTTCAGTTCACGTTCTTCTCTTC10.5No Hit
GACTACAAGGGTATCTAAGCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG10.5No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG10.5No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGAG10.5No Hit
GACTACACGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG10.5No Hit
GACTACACGGGTATCTAAGCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG10.5No Hit
GACTACACGGGTATCTAACCCTGTTTGCTCCCCACGCTTTCGCCCCTCAG10.5No Hit
GCTTCCCGGTTCTCTAGTCCTGTTCGCTCTCCATGCTTTCGCTCCTCAGC10.5No Hit
GACTACTAGGGTATCTAATCCCGGTTTGGGTCTTAGCTATTGTGTGTTCA10.5No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAGCCTCAG10.5No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAA10.5No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG10.5No Hit
GACTACAGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG10.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAGCCTCAG10.5No Hit
GACTACCAGGGTATCTAATCCTGTTCGATACCCGCACCTTCGAGCCTCAG10.5No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCGCCTCAA10.5No Hit
GACTACCCGGGTATCTAATACACATCTGACGCTGCCGCCCGGAGG10.5No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCGCCTCAG10.5No Hit
GACTACCCGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG10.5No Hit
GACTACTGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCGCCTCAG10.5No Hit
GACTACAAGGGTATCTAATCCTGTTCGCTCCCCACGCCTTCGAGCATAAG10.5No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG10.5No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACACTTTCGCGCCTCAG10.5No Hit
GACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGTGCCTCAG10.5No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTGTCTCAG10.5No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCATCAG10.5No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTACCCACACCTTCGAGCTTCAG10.5No Hit
GACTACACAGGGTATCTAATCCTGTTCACTCCCCACGCTTTCGCTCCTCA10.5No Hit
GACTACAAGGGTATCTAATCCTGTTTGATACCCACACTTTAGAGCATCAG10.5No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACACTTTCGAGCCTCAA10.5No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA10.5No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA10.5No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATCAG10.5No Hit
GACTACAAGTGTGTCTATTCCTGTTCGCTCCCCACGCTTTCGTCCATCAG10.5No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA10.5No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCATGCTTTCGAGCCTCAG10.5No Hit
GACTACACGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCAG10.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTGAC10.5No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCATGCTTTCGCACCTCAG10.5No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCATGCTTTCGAGCCTCAG10.5No Hit

[OK]Adapter Content

Adapter graph