FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004835810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004835810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82
Sequences flagged as poor quality0
Sequence length249-251
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC67.317073170731707No Hit
CCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC67.317073170731707No Hit
CCTACGGGCGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC33.6585365853658534No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT33.6585365853658534No Hit
CCTACGGGGGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC33.6585365853658534No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT33.6585365853658534No Hit
CCTACGGGTGGCTGCAGTAAGGAATCTTCCGCAATGGACGAAAGTCTGAC33.6585365853658534No Hit
CCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGACGGAAGTCTGAC33.6585365853658534No Hit
CCTACGGGAGGCTGCAGTAGGGAATCATCCGCAATGGACGAAAGTCTGAC22.4390243902439024No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT22.4390243902439024No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT22.4390243902439024No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT22.4390243902439024No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAC22.4390243902439024No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT22.4390243902439024No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGAT11.2195121951219512No Hit
CCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGCGAGTCTGAA11.2195121951219512No Hit
CCTACGGGCGGCAGCAGTGGGGAATTTTGCGCAATGGGCGAAACCCTGAC11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGAT11.2195121951219512No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT11.2195121951219512No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGAT11.2195121951219512No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAC11.2195121951219512No Hit
CTTACGGGCGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC11.2195121951219512No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT11.2195121951219512No Hit
CCTACGGGTGGCAGCAGGGGGGAATATTGGACAATGGGCGCAAGCCTGAT11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAA11.2195121951219512No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGGACAATGGGGGGAAGCCTGAA11.2195121951219512No Hit
CCTACGGGCGGCTGCAGTGGGGAATTTTCGGCAATGGGCGAAAGCCTGAC11.2195121951219512No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGACGGAAGTCTGAC11.2195121951219512No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT11.2195121951219512No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTCCACAATGGGGGAAACCCTGAT11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGAT11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGAA11.2195121951219512No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGGACAATGGGGGCAAGCCTGAT11.2195121951219512No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT11.2195121951219512No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTCCGCAATGGAGGAAACCCTGAT11.2195121951219512No Hit
CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGGCTGAA11.2195121951219512No Hit
CCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGAT11.2195121951219512No Hit
CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA11.2195121951219512No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGAC11.2195121951219512No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT11.2195121951219512No Hit
CCTACGGGGGGCAGCAGTAGGGAATTTTCGTCAATGGGGGGAACCCTGAA11.2195121951219512No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTAGGGAATATTCCGCAATGGACGAAAGTCTGAC11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTGGGGAATCTTCGGCAATGGACGCAAGCCTGAC11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT11.2195121951219512No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGGCAATGGAGGCAACTCTGAC11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGGCGAAAGCCTGAA11.2195121951219512No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGAT11.2195121951219512No Hit
CCTACGGGGGGCAGCAGTGAGGAATATTGGACAATGGGGGAAAGCCTGAC11.2195121951219512No Hit
CCTACGGGTGGCAGCAGTGGGGAATCTTGGTCAATGGACGAGAGTCTGAC11.2195121951219512No Hit
CCTACGGGTGGGCGCGTTTGCGGCAAGCAAGGCAAGTGTATTGACACTTG11.2195121951219512No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)