FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004835814

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004835814
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111
Sequences flagged as poor quality0
Sequence length35-251
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC76.306306306306306No Hit
CCTACGGGCGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC65.405405405405405No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC43.6036036036036037No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT43.6036036036036037No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT43.6036036036036037No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT32.7027027027027026No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT32.7027027027027026No Hit
CCTACGGGAGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC32.7027027027027026No Hit
CCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT21.8018018018018018No Hit
CCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAATCCTGAT21.8018018018018018No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGGGAAACCCTGAT21.8018018018018018No Hit
CCTACGGGCGGCAGCAGTAGGAAATCTTCCGCAATGGACGAAAGTCTGAC21.8018018018018018No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGGCGCAGGCCTGAA21.8018018018018018No Hit
CCTACGGGGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGATC21.8018018018018018No Hit
CCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT21.8018018018018018No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT21.8018018018018018No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT21.8018018018018018No Hit
CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA21.8018018018018018No Hit
CCTACGGGCGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC21.8018018018018018No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGACGCAAGTCTGAC21.8018018018018018No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT21.8018018018018018No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT21.8018018018018018No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAT21.8018018018018018No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT21.8018018018018018No Hit
CCTACGGGAAGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA10.9009009009009009No Hit
CCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA10.9009009009009009No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGTCAATGGACGAGAGTCTGAA10.9009009009009009No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAC10.9009009009009009No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGAC10.9009009009009009No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGGGGAGAGCCTGAA10.9009009009009009No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTGCACAATGGGCGAAAGCCTGAT10.9009009009009009No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT10.9009009009009009No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT10.9009009009009009No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT10.9009009009009009No Hit
CCTACGGGGGTATCTAATACACATCTCCGAGCCCACGAGACCGTACTAGA10.9009009009009009No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTACACAATGGGCGCAAGCCTGAT10.9009009009009009No Hit
CCTACGGGTGGCTGCAGTGGGGAATCTTGCACAATGGGCGAAAGCCTGAC10.9009009009009009No Hit
CCTACGGGCGGCAGCAGTAGAAAATCTTCCACACTGGACGAAAGTCTGAC10.9009009009009009No Hit
CCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGGGAAACCCTGAT10.9009009009009009No Hit
CCTACGGGCGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT10.9009009009009009No Hit
CCTACGGGATGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC10.9009009009009009No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT10.9009009009009009No Hit
CCTACGGGTGGCTGAGGCAGGAGAATGACGTGAACCCAGGAGGCGGAGGT10.9009009009009009No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGAA10.9009009009009009No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGAT10.9009009009009009No Hit
CCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA10.9009009009009009No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGGGCAATGGGCGAAAGCCTGAC10.9009009009009009No Hit
CCTACGGGGGGCAGCAGTGGGGAATTTTTGACAATGGGGGCAACCCTGAT10.9009009009009009No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT10.9009009009009009No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGACGCAAGCCTGAT10.9009009009009009No Hit
CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGAAAGTCTGAA10.9009009009009009No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGAC10.9009009009009009No Hit
CCTACGGGCGGCTGCAGTGAGGAATATTGGACAATGGGCGAGAGCCTGAT10.9009009009009009No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGAC10.9009009009009009No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT10.9009009009009009No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGGGCAATGGGGGGAACCCTGAC10.9009009009009009No Hit
CCTACGGGCGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT10.9009009009009009No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAACCCTGAT10.9009009009009009No Hit
CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGGAAGCCTGAA10.9009009009009009No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN10.9009009009009009No Hit
CCTACGGGAGGCAGCAGTCGAGAATCATGCACAATGGGGGAAACCCTGAT10.9009009009009009No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTGGTCAATGGGCGCAAGCCTGAA10.9009009009009009No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGAT10.9009009009009009No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGTCAATGGGCGAGAGCCTGAA10.9009009009009009No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGTCAATGGACGAGAGTCTGAA10.9009009009009009No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGAAACCCTGAT10.9009009009009009No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGTCAATGGACGAGAGCCTGAA10.9009009009009009No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT10.9009009009009009No Hit
CCTACGGGAGGCAGCAGTGGGGAATCTTCCGCAATGGACGAAAGTCTGAC10.9009009009009009No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)