FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004835815

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004835815
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111
Sequences flagged as poor quality0
Sequence length35-251
%GC53

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG87.207207207207207No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG76.306306306306306No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG65.405405405405405No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG43.6036036036036037No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG43.6036036036036037No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG43.6036036036036037No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG32.7027027027027026No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTCCTCAG32.7027027027027026No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCAG32.7027027027027026No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGAG21.8018018018018018No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAGCCTCAG21.8018018018018018No Hit
GACTACCGGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCAG21.8018018018018018No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG21.8018018018018018No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACACTTTCGCGCCTCAG21.8018018018018018No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG21.8018018018018018No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG21.8018018018018018No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG21.8018018018018018No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG21.8018018018018018No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACACTTTCGCACCTCAG21.8018018018018018No Hit
NACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG21.8018018018018018No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA21.8018018018018018No Hit
GTAGAACAGATAAGGGGTGCCTGTGTGTTTGAACAGGTTAATTCCTTCGC10.9009009009009009No Hit
GACTACCAGGGTATCTAATCCTGTTCGATCCCCACGCTTTCGTGCATCAG10.9009009009009009No Hit
GACTACCAGGGTATCTAATCCTGTTTGATACCCACGCTTTCGCACCTCAC10.9009009009009009No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACACTTTCGAGCATCAG10.9009009009009009No Hit
GACTACCCGGGTATCTAATCCTGTTTGATACCCACGCTTTCGAGCCTCAA10.9009009009009009No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCAG10.9009009009009009No Hit
GACTACAAGGGTATCTAATCCTGTATGCTCCCCACGCTTTCGTGCATGAG10.9009009009009009No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG10.9009009009009009No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCGTCACGCTTTCGCGCCTCAG10.9009009009009009No Hit
GACTACAAGGGTATCTAATCCCGTTCGCTCCCCTGGCTTTCGCATCTCAG10.9009009009009009No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTGTCGCGCCTCAG10.9009009009009009No Hit
GACTACTAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCAA10.9009009009009009No Hit
GACTACTAGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCAG10.9009009009009009No Hit
GACTACTAGGGTATCTAATGCTGGTTGCTCCCCACGCTTTCGCTCCTCAG10.9009009009009009No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG10.9009009009009009No Hit
TCTAGAGACTTCCGTGCGGCGGAGCTATATGATTGAGGGCAACTATGTGC10.9009009009009009No Hit
CACTCCAAGGGTCTGTCGGGGGGTGTGGTACTGACACTATCGTGTGCGAG10.9009009009009009No Hit
GACTACAAGGGTATCTAAGCCTGTTTGCTCCCCACGCTTTCGTGCATGAG10.9009009009009009No Hit
GACTACCAGGGTATCTAATCCTGTTCGATCCCCGCGCTTTCGAGCTTCAG10.9009009009009009No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTCCCCAGGCTTTCGCACCTCAG10.9009009009009009No Hit
GACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCAG10.9009009009009009No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACCCTTTCGTGCCTCAG10.9009009009009009No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTGTCGCGCCTCAG10.9009009009009009No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN10.9009009009009009No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACATGAG10.9009009009009009No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG10.9009009009009009No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTCTCGCGCCCCAG10.9009009009009009No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA10.9009009009009009No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG10.9009009009009009No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG10.9009009009009009No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAC10.9009009009009009No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGACCCTCAG10.9009009009009009No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG10.9009009009009009No Hit
GACTACTGGGGTCCCTCATCCTGTTTGATACCCACGCTTTCGCGACTCAG10.9009009009009009No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTGAG10.9009009009009009No Hit
GACTACACGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATGAA10.9009009009009009No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA10.9009009009009009No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG10.9009009009009009No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA10.9009009009009009No Hit
GACTACCAGGGTATCTAATCCCTTTCGCTCCCCAGGCCTTCGTGCCTCAG10.9009009009009009No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAC10.9009009009009009No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGAG10.9009009009009009No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCGTGAG10.9009009009009009No Hit
GACTACCCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGAGCATCAG10.9009009009009009No Hit
GACTACTCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGAGCATGAG10.9009009009009009No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)