FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004835824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004835824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114
Sequences flagged as poor quality0
Sequence length248-251
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT54.385964912280701No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT54.385964912280701No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT43.508771929824561No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC32.631578947368421No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT32.631578947368421No Hit
CCTACGGGCGGCTGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGAC32.631578947368421No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT32.631578947368421No Hit
CCTACGGGGGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT32.631578947368421No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT32.631578947368421No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT32.631578947368421No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGAC21.7543859649122806No Hit
CCTACGGGAGGCTGCAGTAGGGAATCTTCCACAATGGGCGAAAGCCTGAT21.7543859649122806No Hit
CCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT21.7543859649122806No Hit
CCTACGGGCGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT21.7543859649122806No Hit
CCTACGGGCGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC21.7543859649122806No Hit
CCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA21.7543859649122806No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT21.7543859649122806No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT21.7543859649122806No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT21.7543859649122806No Hit
CCTACGGGTGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC21.7543859649122806No Hit
CCTACGGGCGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT21.7543859649122806No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT21.7543859649122806No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT21.7543859649122806No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT21.7543859649122806No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT21.7543859649122806No Hit
CTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGATC10.8771929824561403No Hit
CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGTAAGCCTGAA10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATCTTCCGCAATGGGCGAAAGCCTGAC10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGGCGCAGGCCTGAA10.8771929824561403No Hit
CCTACGGGAGGCTGCAGCGGGGAATATTGCACAATGGGCGAAAGCCTGAT10.8771929824561403No Hit
CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGTCAATGGGCGAGAGCCTGAA10.8771929824561403No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT10.8771929824561403No Hit
CCTACGGGCGGCAGCAGTGAGGAATATTGCTCAATGGGCGGGAGCCTGAA10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTCCGCAATGGACGGAAGTCTGAC10.8771929824561403No Hit
CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGACAATGGGCGAGAGCCTGAT10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATCTTGCGCAATGGGCGGAAGCCTGAC10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGACGCAACTATGAT10.8771929824561403No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATCTTCCGCAATGGACGAAAGTCTGAC10.8771929824561403No Hit
CCTACGGGAGGCTGCATGAGGTAGCAATACCTTGATGGCGACCGGCGCAC10.8771929824561403No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGAT10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGAT10.8771929824561403No Hit
CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA10.8771929824561403No Hit
CCTACGGGGGGCTGCAGTAGGGAATCTTGCGCAATGGGCGAAAGCCTGAC10.8771929824561403No Hit
CCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT10.8771929824561403No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTCGGCAATGGGCGAAAGCCTGAC10.8771929824561403No Hit
CCTACGGGTTGCTGCAGTGGGGAATATTGCACAATGGGCGCAACCCTGAT10.8771929824561403No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAATCCTGAT10.8771929824561403No Hit
CCTACGGGAGGCAGCAGTGGGGAATCTTGCACAATGGGCGAAAGCCTGAT10.8771929824561403No Hit
CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGAAAGTCTGAA10.8771929824561403No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACTCTGAT10.8771929824561403No Hit
CCTACGGGCGGCAGCAGTGGGGAATTTTGCGCAATGGAGGAAAGCCTGAC10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCTCAATGGGGGGAACCCTGAC10.8771929824561403No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT10.8771929824561403No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGCTCAATGGAGGAGACTCTGAT10.8771929824561403No Hit
CCTACGGGCGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGCAACCCTGAT10.8771929824561403No Hit
CCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA10.8771929824561403No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGTAAGCCTGAT10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGTCAATGGGCGAAAGCCTGAT10.8771929824561403No Hit
CCTACGGGTGGCTGCAGTGGGGAATCTTTCGCAATGGAGGAAAGTCTGAC10.8771929824561403No Hit
CCTACGGGGGGCTGCAGGGGGGAATATTGCACAATGGAGGAAACTCGGAT10.8771929824561403No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT10.8771929824561403No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT10.8771929824561403No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGCCTGAA10.8771929824561403No Hit
CCTACGGGTGGCTGCAGTGAGGAATATTGCTCAATTGACTAGAGTCTGAA10.8771929824561403No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT10.8771929824561403No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)