FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004835826

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004835826
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85
Sequences flagged as poor quality0
Sequence length249-251
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC910.588235294117647No Hit
CCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT67.0588235294117645No Hit
CCTACGGGCGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT33.5294117647058822No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGAC33.5294117647058822No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT33.5294117647058822No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGAT33.5294117647058822No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT33.5294117647058822No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT22.3529411764705883No Hit
CCTACGGGTGGCTGCAGTGGGGAATTTTGCACAATGGGGGAAACCCTGAT22.3529411764705883No Hit
CCTACGGGCGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC22.3529411764705883No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT22.3529411764705883No Hit
CCTACGGGTGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC22.3529411764705883No Hit
CCTACGGGCGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC22.3529411764705883No Hit
CCTACGGGAGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC22.3529411764705883No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT22.3529411764705883No Hit
CCTACGGGAGGCAGCAGTAGGGAATATTGCGCAATGGACGGAAGTCTGAC11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTTGACAATGGGCGCAAGCCTGAT11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGTCGGCAGACTGAA11.1764705882352942No Hit
CCTACGGGAGGCAGCAGTAGGGAATATTGCGCAATGGACGAAAGTCTGAC11.1764705882352942No Hit
CCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGCTGAA11.1764705882352942No Hit
CCTACGGGCGGCAGCAGTGAGGAATATTGGTCAATGGGCGATGGCCTGAA11.1764705882352942No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGAC11.1764705882352942No Hit
CCTACGGGTGGCTGCAGTGGGGAATCTTGCACAATGGGCGCAAGCCTGAT11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGGCGATGGCCTGAA11.1764705882352942No Hit
CCTACGGGGGCTGCAGTGATAAACCTTTAGCAATAAACGAAAGTTTAACT11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTAGGGAATCATCCGCAATGGACGAAAGTCTGAC11.1764705882352942No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTGGGGAATCTTGGACAATGGGCGCAAGCCTGAT11.1764705882352942No Hit
CCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGGAACCCTGAT11.1764705882352942No Hit
CCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA11.1764705882352942No Hit
CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGTCGGCAGACTGAA11.1764705882352942No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGGCAATGGGGGAAACCCTGAC11.1764705882352942No Hit
CCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA11.1764705882352942No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGAC11.1764705882352942No Hit
CCTACGGAAGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGAT11.1764705882352942No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT11.1764705882352942No Hit
CCTACGTGTGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGCGAAACCCTGAC11.1764705882352942No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGAC11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTGGGGAATTTTGCACAATGGGGGAAACCCTGAT11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTAGGGAATATTGCACAATGGAGGAAACTCTGAT11.1764705882352942No Hit
CCTACGGGCGGCAGCAGTGAGGAATATTGGTCAATGGACGCGAGTCTGAA11.1764705882352942No Hit
CCTCCGGGAGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT11.1764705882352942No Hit
CCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACGCTGAT11.1764705882352942No Hit
CCTACGGGCGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGCCTGAC11.1764705882352942No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT11.1764705882352942No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCGCAATGGGCGCAAGCCTGAC11.1764705882352942No Hit
CCTCGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATG11.1764705882352942No Hit
CCTACGGGAGGCAGCAGTAGGGAATCATCCGCAATGGACGAAAGTCTGAC11.1764705882352942No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT11.1764705882352942No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT11.1764705882352942No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)