FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004838131

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838131
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences232864
Sequences flagged as poor quality0
Sequence length300
%GC32

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAG10835446.53102239934039No Hit
TGAGACCATGGACTGACGACATGTGTACTCACGCTTACAGCTCCAGCTGA10813546.43697608904768No Hit
TTCAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAGA10910.4685138106362512No Hit
GAGACCATGGACTGACGACATGTGTACTCACGCTTACAGCTCCAGCTGAT7260.3117699601484128No Hit
CAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAGAAA3530.15159062800604645No Hit
TCAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAGAA3480.14944345197196646No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)