FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004838149

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838149
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences254067
Sequences flagged as poor quality0
Sequence length300
%GC32

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGACCATGGACTGACGACATGTGTACTCACGCTTACAGCTCCAGCTGA11874646.738065156041515No Hit
TTTCAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAG11809746.48262072602896No Hit
TTCAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAGA14840.5840978954370304No Hit
GAGACCATGGACTGACGACATGTGTACTCACGCTTACAGCTCCAGCTGAT6870.2704011146666037No Hit
TCAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAGAA3450.13579095278017217No Hit
CAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAGAAA3190.1255574317010867No Hit
CGTCGTGCTCATACACTTCCTGTGTACTTTTATGAATTTCAACATAGAAC3010.11847268633864295No Hit
CTCTGGGTAGTCACCAACGGTATGTGTGTTATCTCCTTCTTAGTGCAGGT2720.10705837436581689No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)