FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004838163

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838163
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences263898
Sequences flagged as poor quality0
Sequence length300
%GC31

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGACCATGGACTGACGACATGTGTACTCACGCTTACAGCTCCAGCTGA12582747.68016430590607No Hit
TTTCAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAG12362746.846508878430306No Hit
TTCAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAGA7620.28874792533478844No Hit
GAGACCATGGACTGACGACATGTGTACTCACGCTTACAGCTCCAGCTGAT6510.2466862196757838No Hit
TCAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAGAA3770.1428582255265292No Hit
CAGGTAGTTCATAATGCAATCATAATAGAGATGACTAATTTAGGAAGAAA3770.1428582255265292No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)