Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004838293 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 185415585 |
Total Bases | 13.9 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 11147967 | 6.01242177134139 | Clontech SMART CDS Primer II A (100% over 26bp) |
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATAATTATCTCGTA | 838627 | 0.4522958520450155 | Illumina Paired End PCR Primer 2 (97% over 38bp) |
AAGCAGTGGTATCAACGCAGAGTACGCGGGAAGCAGTGGTATCAACGCAG | 481575 | 0.25972735787015966 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |
ATGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 238013 | 0.1283673106551426 | Clontech SMART CDS Primer II A (96% over 26bp) |