Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004838319 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 150987024 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGAGGTTTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA | 1242369 | 0.8228316361808682 | Illumina Paired End PCR Primer 2 (97% over 37bp) |
AAGCAGTGGTATCAACGCAGAGTACGCGGGAAGCAGTGGTATCAACGCAGAGTACGCGGGAAGCAGTGGTATCAA | 711198 | 0.4710325305835554 | Clontech Universal Primer Mix Long (96% over 26bp) |
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 259400 | 0.17180284313703673 | Clontech SMART CDS Primer II A (100% over 26bp) |