Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004838349 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 142992904 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGGAAACCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA | 3702081 | 2.588996304320108 | Illumina Paired End PCR Primer 2 (97% over 36bp) |
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 328269 | 0.22957013307457552 | Clontech SMART CDS Primer II A (100% over 26bp) |
TATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGGAAACCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA | 147833 | 0.10338485048181133 | Illumina Paired End PCR Primer 2 (97% over 36bp) |