FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838471

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838471
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22587553
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA95150.08.59475694
ATCGGAA88200.07.40694994
AGATCGG116250.06.630465594
TAGATCG34050.06.487447794
TCGGAAG135900.05.014662394
Produced by FastQC (version 0.11.5)