FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21668447
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA153200.08.2217594
ATCGGAA143400.07.931484794
TAGATCG49400.07.51602994
AGATCGG180450.06.98017394
TCGGAAG186000.05.685358594
CGGAAGA188100.05.147148694
ACACGTC81600.05.06851694
Produced by FastQC (version 0.11.5)