FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838504

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838504
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21397639
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA103000.07.57494994
ATCGGAA98800.07.46881294
GCGTCGT48900.07.208770894
TAGATCG36250.06.74201192-93
AGATCGG120800.06.69222294
GTCGTGT46550.05.755247694
AGCGTCG56900.05.61682392-93
TCGTGTA37350.05.41111494
AAGAGCG106150.05.401926594
AGAGCGT82850.05.38939494
CGTCGTG50500.05.025869494
Produced by FastQC (version 0.11.5)