FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20477578
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA116150.08.86221794
AGATCGG138050.08.10322794
ATCGGAA111700.07.826674594
GCGTCGT49450.07.699033394
TAGATCG43450.07.031387394
GTCGTGT47900.06.5744194
TCGGAAG142900.06.38097494
AGAGCGT84400.06.125869894
AGCGTCG60000.06.110275794
TCGTGTA37800.05.222292492-93
AAGAGCG105150.05.05110894
CGGAAGA149400.05.01780592-93
CAGATCG73250.05.00500494
Produced by FastQC (version 0.11.5)