FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838511

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838511
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18201168
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA84650.08.38394794
AGATCGG108100.08.08696994
TAGATCG31200.07.983987394
GATCGGA89150.07.45982992-93
TCGGAAG117900.05.78033294
Produced by FastQC (version 0.11.5)