FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838530

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838530
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15867264
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG55100.07.165309494
GATCGGA42200.06.459855694
ATCGGAA42700.05.72359792-93
TCGTGTA19854.815811E-75.445961594
TAGATCG15055.4569682E-115.30908594
Produced by FastQC (version 0.11.5)