FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004838644

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838644
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29378003
Sequences flagged as poor quality0
Sequence length125
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACTTCAAGAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT2456520.8361766454990152No Hit
TCACTTCAAGATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA1593600.5424466734515617No Hit
TCACTTCAAGAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC733100.24954044698000744No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)