FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004838646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21219765
Sequences flagged as poor quality0
Sequence length125
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTAAGAATCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT1582450.7457434142178295No Hit
TGTAAGAATCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA1073670.505976385695129No Hit
TGTAAGAATCAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC383530.1807418696672654No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)