FastQCFastQC Report
Sun 5 Jun 2022
EGAF00004838653

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838653
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27535023
Sequences flagged as poor quality0
Sequence length125
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAATGGAGGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT2140170.7772537542460015No Hit
AGAAATGGAGGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA1585980.5759864446091074No Hit
AGAAATGGAGGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC349660.1269873644194886No Hit
AGAAATGGAGGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC295980.10749219276119726No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)