FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4408891
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCG9250.027.435814145
CACACGG18700.018.611917145
GAGCACC35550.018.356693145
TTTCGGG17400.018.33559145
CGGAATG64450.018.113169145
ACGTTTG16000.017.220871145
CGGAAGG22350.015.896814145
ACACGTA21300.015.318789145
CTGAACG18650.013.996363145
GATCGGG8602.728484E-1013.490034145
CGACGCT4050.004554515210.7414553
TTCGGAG19250.010.170084145
GTCACGG21700.010.024276145
CCAGTCC39500.09.54548145
ACACGTG15805.0931703E-109.178346145
TTCGGGG9753.5592486E-58.924176145
CGTACGA1300.00756687868.92294115-19
AGGGGGG87500.08.701072145
GAGTCGG10951.4786692E-58.608367145
CGGCGTG14358.545794E-88.589908145
Produced by FastQC (version 0.11.5)