FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838693

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838693
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56905801
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAAAGA83700.017.0696874
AACGAAA158500.016.7550891
TGACTAC142400.016.59798210
AACGGGA82750.016.4657121
ACAAAAG92500.016.0760253
GGGACCT110950.016.0531961
GCCCGAA73350.015.81273651
TGCGACG95350.015.803171
AGCCACG135400.015.7657241
ATACCGA114600.015.7052991
CGAAACA110950.015.6827753
AAAGATG91350.015.639866
AGAAAAG65500.015.6333523
CTGGACG78800.015.6276761
AGGATAC93800.015.6181738
CGGAACC88150.015.5320091
AGGCGCT79550.015.5124888
CTCGAGG115250.015.377791
AGGCCCA96300.015.2469818
TAACGAC106500.015.0794921
Produced by FastQC (version 0.11.5)