FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838697

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838697
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65675273
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAAAGA100800.017.3817584
AACGAAA177550.016.7501031
TGACTAC155750.016.43219410
ACAAAAG110050.016.1606963
AACGGGA97000.016.06791
AAAGATG108900.015.906856
GGGACCT124900.015.7328281
CGGAACC105450.015.6055261
AGCCACG160800.015.5905211
AGGCGCT92250.015.5707048
AAAAGAT77250.015.561815
ATACCGA134200.015.4879441
CGAAACA132400.015.4762223
GCCCGAA86250.015.4397971
CTCGAGG128350.015.4386631
CTGGACG92050.015.4242311
ACGAAAC110650.015.3399512
AACCTGA132000.015.2954731
TCGGGAC92950.015.2748841
TACCGGG136100.015.2555411
Produced by FastQC (version 0.11.5)