FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838699

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838699
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73355341
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAAAGA114550.017.0813714
AACGAAA197350.016.492781
AACGGGA111350.016.4305781
ACAAAAG117950.016.0575353
GGGACCT140650.015.9915091
TGACTAC180500.015.82426610
GCCCGAA100550.015.8182561
ATACCGA148900.015.8156291
AGGCGCT102050.015.810628
CGAAACA142200.015.7942783
AGCCACG177400.015.7707941
CGGAACC114800.015.7161251
AAAGATG122800.015.6020486
AGGATAC124150.015.5298418
TAACGAC140100.015.5275321
ACGAAAC120500.015.4936932
TGCGACG114700.015.489751
CTGGACG105400.015.477041
AAAAGAT86200.015.387995
TTGACCC181900.015.3443111
Produced by FastQC (version 0.11.5)